SNP Detail For rs1541424
1.Mapping Information
Human SNP ID rs1541424
Human chromosome chr7
Human SNP position 26517802
Pig chromosome chr18
Pig SNP position 50699478
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region7p15.2
Chromosome idchr7
Chromosome position26517802
Reported geneIntergenic
Mapped geneLOC441204 - KIAA0087
Upstream gene id441204
Downstream gene id9808
SNP gene ids
Upstream gene distance21435
Downstream gene distance15319
SNP risk allelers1541424-G
SNPsrs1541424
Merged0
SNP id current1541424
Contextintergenic_variant
Intergenic1
Allele frequency0.161
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.02
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264