Human SNP ID | rs1539019 |
---|---|
Human chromosome | chr1 |
Human SNP position | 247436999 |
Pig chromosome | chr2 |
Pig SNP position | 57842617 |
PubMed ID | 20031576 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031576 |
Study | Association of novel genetic Loci with circulating fibrinogen levels: a genome-wide association study in 6 population-based cohorts. |
Disease/Trait | Fibrinogen |
Initial sample | 22,096 European ancestry individuals |
Replication sample | 17,686 European ancestry female individuals |
Region | 1q44 |
Chromosome id | chr1 |
Chromosome position | 247436999 |
Reported gene | NLRP3 |
Mapped gene | NLRP3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 114548 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1539019-A |
SNPs | rs1539019 |
Merged | 0 |
SNP id current | 1539019 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.37 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 0.04 |
%95 Ci | [0.03-0.05] g/L decrease |
Platform | Affymetrix, Illumina [~ 2661766] (imputed) |
CNV | N |
Mapped trait | fibrinogen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004623 |
Study accession | GCST000366 |