SNP Detail For rs1533106
1.Mapping Information
Human SNP ID rs1533106
Human chromosome chr5
Human SNP position 126752020
Pig chromosome chr2
Pig SNP position 135083811
2.Annotation Information
PubMed ID26242244
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/26242244
StudyAssociation of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia.
Disease/TraitExploratory eye movement dysfunction in schizophrenia (total eye scanning length)
Initial sample128 Han Chinese ancestry cases
Replication sampleNA
Region5q23.2
Chromosome idchr5
Chromosome position126752020
Reported geneNR
Mapped geneLOC102723557
Upstream gene id
Downstream gene id
SNP gene ids102723557
Upstream gene distance
Downstream gene distance
SNP risk allelers1533106-?
SNPsrs1533106
Merged
SNP id current1533106
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta83.03
%95 Ci[47.2-118.86] unit decrease
PlatformIllumina [498648]
CNVN
Mapped traitexploratory eye movement measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007700
Study accessionGCST003066