Human SNP ID | rs1529316 |
---|---|
Human chromosome | chr8 |
Human SNP position | 3970616 |
Pig chromosome | chr15 |
Pig SNP position | 40362337 |
PubMed ID | 19010793 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19010793 |
Study | Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 978 European ancestry cases, 883 European ancestry controls |
Replication sample | NA |
Region | 8p23.2 |
Chromosome id | chr8 |
Chromosome position | 3970616 |
Reported gene | CSMD1 |
Mapped gene | CSMD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 64478 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1529316-? |
SNPs | rs1529316 |
Merged | 0 |
SNP id current | 1529316 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.47 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.36 |
%95 Ci | [NR] |
Platform | Illumina [551642] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST000269 |