SNP Detail For rs1529316
1.Mapping Information
Human SNP ID rs1529316
Human chromosome chr8
Human SNP position 3970616
Pig chromosome chr15
Pig SNP position 40362337
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample978 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region8p23.2
Chromosome idchr8
Chromosome position3970616
Reported geneCSMD1
Mapped geneCSMD1
Upstream gene id
Downstream gene id
SNP gene ids64478
Upstream gene distance
Downstream gene distance
SNP risk allelers1529316-?
SNPsrs1529316
Merged0
SNP id current1529316
Contextintron_variant
Intergenic0
Allele frequency0.47
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.36
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000269