Human SNP ID | rs1525739 |
---|---|
Human chromosome | chr7 |
Human SNP position | 16850188 |
Pig chromosome | chr8 |
Pig SNP position | 111537139 |
PubMed ID | 23386860 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23386860 |
Study | Exploring genome-wide - dietary heme iron intake interactions and the risk of type 2 diabetes. |
Disease/Trait | Type 2 diabetes (dietary heme iron intake interaction) |
Initial sample | 1,806 European ancestry cases, 2,965 European ancestry controls |
Replication sample | NA |
Region | 7p21.1 |
Chromosome id | chr7 |
Chromosome position | 16850188 |
Reported gene | AGR2, AGR3 |
Mapped gene | LOC100287613 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100287613 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1525739-? |
SNPs | rs1525739 |
Merged | 0 |
SNP id current | 1525739 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.44 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix [681770] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001843 |