SNP Detail For rs151326733
1.Mapping Information
Human SNP ID rs151326733
Human chromosome chr12
Human SNP position 16036544
Pig chromosome chr5
Pig SNP position 59879355
2.Annotation Information
PubMed ID25027321
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25027321
StudyGenome-wide association and admixture analysis of glaucoma in the Women__s Health Initiative.
Disease/TraitGlaucoma
Initial sample658 African American prevalent cases, 1,062 African American incident cases, 6,067 African American controls, 153 Hispanic prevalent cases, 336 Hispanic incident cases, 2,685 Hispanic controls
Replication sampleNA
Region12p12.3
Chromosome idchr12
Chromosome position16036544
Reported geneNR
Mapped geneDERA
Upstream gene id
Downstream gene id
SNP gene ids51071
Upstream gene distance
Downstream gene distance
SNP risk allelers151326733-C
SNPsrs151326733
Merged0
SNP id current151326733
Contextintron_variant
Intergenic0
Allele frequency0.026
P value0.00000002
Pvalue mlog7.69897000433601
P value text(AA, prevalent)
Or beta2.2
%95 Ci[1.67-2.89]
PlatformAffymetrix [up to 15784307] (imputed)
CNVN
Mapped traitglaucoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000516
Study accessionGCST002529