SNP Detail For rs151058966
1.Mapping Information
Human SNP ID rs151058966
Human chromosome chr3
Human SNP position 124556840
Pig chromosome chr13
Pig SNP position 145287563
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q21.2
Chromosome idchr3
Chromosome position124556840
Reported geneKALRN
Mapped geneLOC105374076, KALRN
Upstream gene id
Downstream gene id
SNP gene ids105374076, 8997
Upstream gene distance
Downstream gene distance
SNP risk allelers151058966-G
SNPsrs151058966
Merged0
SNP id current151058966
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.0000005
Pvalue mlog6.30102999566398
P value text(AA)
Or beta0.341
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264