SNP Detail For rs150888153
1.Mapping Information
Human SNP ID rs150888153
Human chromosome chr3
Human SNP position 140963071
Pig chromosome chr13
Pig SNP position 89616423
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region3q23
Chromosome idchr3
Chromosome position140963071
Reported geneNR
Mapped geneSLC25A36
Upstream gene id
Downstream gene id
SNP gene ids55186
Upstream gene distance
Downstream gene distance
SNP risk allelers150888153-?
SNPsrs150888153
Merged0
SNP id current150888153
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306