Human SNP ID | rs150758818 |
---|---|
Human chromosome | chr17 |
Human SNP position | 58247407 |
Pig chromosome | chr12 |
Pig SNP position | 36276891 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1/FVC ratio in COPD |
Initial sample | 5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases |
Replication sample | NA |
Region | 17q22 |
Chromosome id | chr17 |
Chromosome position | 58247407 |
Reported gene | LPO |
Mapped gene | LPO |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4025 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs150758818-G |
SNPs | rs150758818 |
Merged | 0 |
SNP id current | 150758818 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.986 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (AA) |
Or beta | 0.12 |
%95 Ci | NR unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | response to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST003265 |