SNP Detail For rs150758818
1.Mapping Information
Human SNP ID rs150758818
Human chromosome chr17
Human SNP position 58247407
Pig chromosome chr12
Pig SNP position 36276891
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region17q22
Chromosome idchr17
Chromosome position58247407
Reported geneLPO
Mapped geneLPO
Upstream gene id
Downstream gene id
SNP gene ids4025
Upstream gene distance
Downstream gene distance
SNP risk allelers150758818-G
SNPsrs150758818
Merged0
SNP id current150758818
Contextintron_variant
Intergenic0
Allele frequency0.986
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.12
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265