SNP Detail For rs150404479
1.Mapping Information
Human SNP ID rs150404479
Human chromosome chr1
Human SNP position 43222879
Pig chromosome chr6
Pig SNP position 155450112
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region1p34.2
Chromosome idchr1
Chromosome position43222879
Reported geneNR
Mapped geneLOC105378685, CFAP57
Upstream gene id
Downstream gene id
SNP gene ids105378685, 149465
Upstream gene distance
Downstream gene distance
SNP risk allelers150404479-?
SNPsrs150404479
Merged0
SNP id current150404479
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306