Human SNP ID | rs150365886 |
---|---|
Human chromosome | chr6 |
Human SNP position | 123715801 |
Pig chromosome | chr1 |
Pig SNP position | 273579316 |
PubMed ID | 26252872 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26252872 |
Study | Variations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level. |
Disease/Trait | Cerebral amyloid deposition in APOEe4 non-carriers (PET imaging) |
Initial sample | 370 European and other ancestry APOEe4 non-carriers |
Replication sample | NA |
Region | 6q22.31 |
Chromosome id | chr6 |
Chromosome position | 123715801 |
Reported gene | TRDN, NKAIN2 |
Mapped gene | LOC105377981 - NKAIN2 |
Upstream gene id | 105377981 |
Downstream gene id | 154215 |
SNP gene ids | |
Upstream gene distance | 46830 |
Downstream gene distance | 88036 |
SNP risk allele | rs150365886-G |
SNPs | rs150365886 |
Merged | |
SNP id current | 150365886 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.0023 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 0.4279 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [~ 9000000] (imputed) |
CNV | N |
Mapped trait | cerebral amyloid deposition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007707 |
Study accession | GCST003074 |