SNP Detail For rs150365886
1.Mapping Information
Human SNP ID rs150365886
Human chromosome chr6
Human SNP position 123715801
Pig chromosome chr1
Pig SNP position 273579316
2.Annotation Information
PubMed ID26252872
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26252872
StudyVariations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level.
Disease/TraitCerebral amyloid deposition in APOEe4 non-carriers (PET imaging)
Initial sample370 European and other ancestry APOEe4 non-carriers
Replication sampleNA
Region6q22.31
Chromosome idchr6
Chromosome position123715801
Reported geneTRDN, NKAIN2
Mapped geneLOC105377981 - NKAIN2
Upstream gene id105377981
Downstream gene id154215
SNP gene ids
Upstream gene distance46830
Downstream gene distance88036
SNP risk allelers150365886-G
SNPsrs150365886
Merged
SNP id current150365886
Contextintergenic_variant
Intergenic1
Allele frequency0.0023
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta0.4279
%95 Ci[NR] unit decrease
PlatformIllumina [~ 9000000] (imputed)
CNVN
Mapped traitcerebral amyloid deposition measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007707
Study accessionGCST003074