SNP Detail For rs1498604
1.Mapping Information
Human SNP ID rs1498604
Human chromosome chr5
Human SNP position 59037333
Pig chromosome chr16
Pig SNP position 40711150
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position59037333
Reported genePDE4D
Mapped genePDE4D
Upstream gene id
Downstream gene id
SNP gene ids5144
Upstream gene distance
Downstream gene distance
SNP risk allelers1498604-A
SNPsrs1498604
Merged0
SNP id current1498604
Contextintron_variant
Intergenic0
Allele frequency0.768
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.011
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264