Human SNP ID | rs149747749 |
---|---|
Human chromosome | chr6 |
Human SNP position | 9937127 |
Pig chromosome | chr7 |
Pig SNP position | 7059782 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Asymmetrical dimethylarginine levels |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 6p24.3 |
Chromosome id | chr6 |
Chromosome position | 9937127 |
Reported gene | intergenic |
Mapped gene | LOC105369145 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369145 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs149747749-A |
SNPs | rs149747749 |
Merged | 0 |
SNP id current | 149747749 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.005 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.645 |
%95 Ci | [0.36-0.93] unit decrease |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | asymmetrical dimethylarginine measurement, serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006522, http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002241 |