SNP Detail For rs149747749
1.Mapping Information
Human SNP ID rs149747749
Human chromosome chr6
Human SNP position 9937127
Pig chromosome chr7
Pig SNP position 7059782
2.Annotation Information
PubMed ID24159190
JournalEur Heart J
Linkwww.ncbi.nlm.nih.gov/pubmed/24159190
StudyGenome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality.
Disease/TraitAsymmetrical dimethylarginine levels
Initial sample5110 European ancestry individuals
Replication sampleNA
Region6p24.3
Chromosome idchr6
Chromosome position9937127
Reported geneintergenic
Mapped geneLOC105369145
Upstream gene id
Downstream gene id
SNP gene ids105369145
Upstream gene distance
Downstream gene distance
SNP risk allelers149747749-A
SNPsrs149747749
Merged0
SNP id current149747749
Contextintron_variant
Intergenic0
Allele frequency0.005
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.645
%95 Ci[0.36-0.93] unit decrease
PlatformAffymetrix, Illumina [10085758] (imputed)
CNVN
Mapped traitasymmetrical dimethylarginine measurement, serum dimethylarginine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006522, http://www.ebi.ac.uk/efo/EFO_0005418
Study accessionGCST002241