Human SNP ID | rs149432766 |
---|---|
Human chromosome | chrX |
Human SNP position | 93801889 |
Pig chromosome | chrX |
Pig SNP position | 92621423 |
PubMed ID | 26053186 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26053186 |
Study | Mercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer. |
Disease/Trait | 3-hydroxy-1-methylpropylmercapturic acid levels in smokers |
Initial sample | 361 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 440 European ancestry current smoker individuals, 452 Latino current smoker individuals, 702 Japanese ancestry current smoker individuals |
Replication sample | NA |
Region | Xq21.32 |
Chromosome id | chrX |
Chromosome position | 93801889 |
Reported gene | NR |
Mapped gene | FAM133A - CCNB1IP1P3 |
Upstream gene id | 286499 |
Downstream gene id | 100128456 |
SNP gene ids | |
Upstream gene distance | 89615 |
Downstream gene distance | 974661 |
SNP risk allele | rs149432766-? |
SNPs | rs149432766 |
Merged | |
SNP id current | 149432766 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | (AA) |
Or beta | 1.3762 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [up to 11892802] (imputed) |
CNV | N |
Mapped trait | smoking behavior, 3-hydroxy-1-methylpropylmercapturic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007015 |
Study accession | GCST002957 |