SNP Detail For rs149432766
1.Mapping Information
Human SNP ID rs149432766
Human chromosome chrX
Human SNP position 93801889
Pig chromosome chrX
Pig SNP position 92621423
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxy-1-methylpropylmercapturic acid levels in smokers
Initial sample361 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 440 European ancestry current smoker individuals, 452 Latino current smoker individuals, 702 Japanese ancestry current smoker individuals
Replication sampleNA
RegionXq21.32
Chromosome idchrX
Chromosome position93801889
Reported geneNR
Mapped geneFAM133A - CCNB1IP1P3
Upstream gene id286499
Downstream gene id100128456
SNP gene ids
Upstream gene distance89615
Downstream gene distance974661
SNP risk allelers149432766-?
SNPsrs149432766
Merged
SNP id current149432766
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000004
Pvalue mlog7.39794000867203
P value text(AA)
Or beta1.3762
%95 Ci[NR] unit decrease
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxy-1-methylpropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007015
Study accessionGCST002957