SNP Detail For rs149074315
1.Mapping Information
Human SNP ID rs149074315
Human chromosome chr15
Human SNP position 57796691
Pig chromosome chr1
Pig SNP position 126308656
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region15q21.3
Chromosome idchr15
Chromosome position57796691
Reported geneIntergenic
Mapped geneLOC105370834 - LOC107984724
Upstream gene id105370834
Downstream gene id107984724
SNP gene ids
Upstream gene distance13052
Downstream gene distance65605
SNP risk allelers149074315-C
SNPsrs149074315
Merged0
SNP id current149074315
Contextintergenic_variant
Intergenic1
Allele frequency0.996
P value0.0000004
Pvalue mlog6.39794000867203
P value text(AA)
Or beta0.14
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264