SNP Detail For rs1490075
1.Mapping Information
Human SNP ID rs1490075
Human chromosome chr3
Human SNP position 176704864
Pig chromosome chr13
Pig SNP position 123968101
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region3q26.32
Chromosome idchr3
Chromosome position176704864
Reported geneintergenic
Mapped geneLOC105374229
Upstream gene id
Downstream gene id
SNP gene ids105374229
Upstream gene distance
Downstream gene distance
SNP risk allelers1490075-?
SNPsrs1490075
Merged0
SNP id current1490075
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(SF9)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651