SNP Detail For rs148992089
1.Mapping Information
Human SNP ID rs148992089
Human chromosome chr5
Human SNP position 158952834
Pig chromosome chr16
Pig SNP position 70311061
2.Annotation Information
PubMed ID26252872
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26252872
StudyVariations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level.
Disease/TraitCognitive decline rate in late mild cognitive impairment
Initial sample472 European ancestry cases, 47 cases
Replication sampleNA
Region5q33.3
Chromosome idchr5
Chromosome position158952834
Reported geneEBF1
Mapped geneEBF1
Upstream gene id
Downstream gene id
SNP gene ids1879
Upstream gene distance
Downstream gene distance
SNP risk allelers148992089-T
SNPsrs148992089
Merged
SNP id current148992089
Contextintron_variant
Intergenic0
Allele frequency0.01
P value0.0000008
Pvalue mlog6.09691001300805
P value text(EA)
Or beta0.7506
%95 Ci[0.46-1.04] unit increase
PlatformIllumina [~ 9000000] (imputed)
CNVN
Mapped traitcognitive impairment, cognitive decline measurement
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0100543, http://www.ebi.ac.uk/efo/EFO_0007710
Study accessionGCST003075