Human SNP ID | rs1488864 |
---|---|
Human chromosome | chr11 |
Human SNP position | 6321099 |
Pig chromosome | chr9 |
Pig SNP position | 3993953 |
PubMed ID | 24556642 |
---|---|
Journal | Caries Res |
Link | www.ncbi.nlm.nih.gov/pubmed/24556642 |
Study | Genome-wide association study of primary dentition pit-and-fissure and smooth surface caries. |
Disease/Trait | Smooth-surface caries |
Initial sample | 1006 European ancestry individuals |
Replication sample | NA |
Region | 11p15.4 |
Chromosome id | chr11 |
Chromosome position | 6321099 |
Reported gene | PRKCDBP |
Mapped gene | LOC101927825 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927825 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1488864-A |
SNPs | rs1488864 |
Merged | 0 |
SNP id current | 1488864 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.0932 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 1.295 |
%95 Ci | [NR] unit increase |
Platform | Illumina [1216189] (imputed) |
CNV | N |
Mapped trait | smooth surface dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006339 |
Study accession | GCST002361 |