SNP Detail For rs1488864
1.Mapping Information
Human SNP ID rs1488864
Human chromosome chr11
Human SNP position 6321099
Pig chromosome chr9
Pig SNP position 3993953
2.Annotation Information
PubMed ID24556642
JournalCaries Res
Linkwww.ncbi.nlm.nih.gov/pubmed/24556642
StudyGenome-wide association study of primary dentition pit-and-fissure and smooth surface caries.
Disease/TraitSmooth-surface caries
Initial sample1006 European ancestry individuals
Replication sampleNA
Region11p15.4
Chromosome idchr11
Chromosome position6321099
Reported genePRKCDBP
Mapped geneLOC101927825
Upstream gene id
Downstream gene id
SNP gene ids101927825
Upstream gene distance
Downstream gene distance
SNP risk allelers1488864-A
SNPsrs1488864
Merged0
SNP id current1488864
Contextupstream_gene_variant
Intergenic0
Allele frequency0.0932
P value0.000001
Pvalue mlog6
P value text
Or beta1.295
%95 Ci[NR] unit increase
PlatformIllumina [1216189] (imputed)
CNVN
Mapped traitsmooth surface dental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006339
Study accessionGCST002361