Human SNP ID | rs148635969 |
---|---|
Human chromosome | chr4 |
Human SNP position | 71451250 |
Pig chromosome | chr8 |
Pig SNP position | 71944293 |
PubMed ID | 24951543 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24951543 |
Study | Meta-analysis of genome-wide association studies in multiethnic Asians identifies two loci for age-related nuclear cataract. |
Disease/Trait | Age-related nuclear cataracts |
Initial sample | 2,369 Malay ancestry individuals, 2,200 Indian ancestry individuals, 2,571 Chinese ancestry individuals |
Replication sample | NA |
Region | 4q13.3 |
Chromosome id | chr4 |
Chromosome position | 71451250 |
Reported gene | SLC4A4 |
Mapped gene | SLC4A4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8671 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs148635969-A |
SNPs | rs148635969 |
Merged | 0 |
SNP id current | 148635969 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Fixed effect) |
Or beta | 0.27 |
%95 Ci | [0.15-0.39] unit increase |
Platform | Illumina [4736131] (imputed) |
CNV | N |
Mapped trait | age-related nuclear cataract |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0011142 |
Study accession | GCST002498 |