SNP Detail For rs1486134
1.Mapping Information
Human SNP ID rs1486134
Human chromosome chr2
Human SNP position 67412637
Pig chromosome JH118514-1
Pig SNP position 67174
2.Annotation Information
PubMed ID26098869
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26098869
StudyCommon variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer.
Disease/TraitPancreatic cancer
Initial sample7,638 cases, 7,364 controls
Replication sample2,287 cases, 4,205 controls
Region2p14
Chromosome idchr2
Chromosome position67412637
Reported geneETAA1
Mapped geneETAA1 - LOC105374788
Upstream gene id54465
Downstream gene id105374788
SNP gene ids
Upstream gene distance2224
Downstream gene distance110036
SNP risk allelers1486134-G
SNPsrs1486134
Merged
SNP id current1486134
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.275
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta1.14
%95 Ci[1.09-1.19]
PlatformIllumina [866891] (imputed)
CNVN
Mapped traitpancreatic carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST002991