Human SNP ID | rs1486134 |
---|---|
Human chromosome | chr2 |
Human SNP position | 67412637 |
Pig chromosome | JH118514-1 |
Pig SNP position | 67174 |
PubMed ID | 26098869 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26098869 |
Study | Common variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer. |
Disease/Trait | Pancreatic cancer |
Initial sample | 7,638 cases, 7,364 controls |
Replication sample | 2,287 cases, 4,205 controls |
Region | 2p14 |
Chromosome id | chr2 |
Chromosome position | 67412637 |
Reported gene | ETAA1 |
Mapped gene | ETAA1 - LOC105374788 |
Upstream gene id | 54465 |
Downstream gene id | 105374788 |
SNP gene ids | |
Upstream gene distance | 2224 |
Downstream gene distance | 110036 |
SNP risk allele | rs1486134-G |
SNPs | rs1486134 |
Merged | |
SNP id current | 1486134 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.275 |
P value | 0.000000003 |
Pvalue mlog | 8.52287874528033 |
P value text | |
Or beta | 1.14 |
%95 Ci | [1.09-1.19] |
Platform | Illumina [866891] (imputed) |
CNV | N |
Mapped trait | pancreatic carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST002991 |