SNP Detail For rs148560653
1.Mapping Information
Human SNP ID rs148560653
Human chromosome chr16
Human SNP position 60905873
Pig chromosome chr6
Pig SNP position 20665354
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region16q21
Chromosome idchr16
Chromosome position60905873
Reported geneIntergenic
Mapped geneLOC107984812 - LOC100421593
Upstream gene id107984812
Downstream gene id100421593
SNP gene ids
Upstream gene distance146651
Downstream gene distance22095
SNP risk allelers148560653-C
SNPsrs148560653
Merged0
SNP id current148560653
Contextregulatory_region_variant
Intergenic1
Allele frequency0.997
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.863
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262