SNP Detail For rs1483035
1.Mapping Information
Human SNP ID rs1483035
Human chromosome chr4
Human SNP position 155588884
Pig chromosome chr8
Pig SNP position 46394309
2.Annotation Information
PubMed ID26379185
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26379185
StudyNo Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.
Disease/TraitInfluenza A (H1N1) severity
Initial sample49 European ancestry severe cases, 107 European ancestry mild cases
Replication sampleNA
Region4q32.1
Chromosome idchr4
Chromosome position155588884
Reported geneGUCY1A3
Mapped geneLOC105377504 - GUCY1A3
Upstream gene id105377504
Downstream gene id2982
SNP gene ids
Upstream gene distance66175
Downstream gene distance77684
SNP risk allelers1483035-?
SNPsrs1483035
Merged
SNP id current1483035
Contextintergenic_variant
Intergenic1
Allele frequency0.5385
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta4.16
%95 Ci[2.18-7.94]
PlatformAffymetrix [547296]
CNVN
Mapped traitinfluenza A severity measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007743
Study accessionGCST003126