SNP Detail For rs148200394
1.Mapping Information
Human SNP ID rs148200394
Human chromosome chr3
Human SNP position 152858319
Pig chromosome chr13
Pig SNP position 101054921
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q25.2
Chromosome idchr3
Chromosome position152858319
Reported geneIntergenic
Mapped geneLOC107986146
Upstream gene id
Downstream gene id
SNP gene ids107986146
Upstream gene distance
Downstream gene distance
SNP risk allelers148200394-T
SNPsrs148200394
Merged0
SNP id current148200394
Contextintergenic_variant
Intergenic0
Allele frequency0.999
P value0.00000002
Pvalue mlog7.69897000433601
P value text(AA)
Or beta2.133
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262