SNP Detail For rs148064379
1.Mapping Information
Human SNP ID rs148064379
Human chromosome chr3
Human SNP position 5679087
Pig chromosome chr13
Pig SNP position 68563448
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3p26.1
Chromosome idchr3
Chromosome position5679087
Reported geneIntergenic
Mapped geneMRPS35P1 - LOC105376939
Upstream gene id339910
Downstream gene id105376939
SNP gene ids
Upstream gene distance231984
Downstream gene distance5210
SNP risk allelers148064379-G
SNPsrs148064379
Merged0
SNP id current148064379
Contextintergenic_variant
Intergenic1
Allele frequency0.999
P value0.00000005
Pvalue mlog7.30102999566398
P value text(AA)
Or beta0.368
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264