Human SNP ID | rs1478693 |
---|---|
Human chromosome | chr16 |
Human SNP position | 7114218 |
Pig chromosome | chr3 |
Pig SNP position | 36451645 |
PubMed ID | 23728906 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23728906 |
Study | A genome-wide association study of sleep habits and insomnia. |
Disease/Trait | Sleep time |
Initial sample | 2,322 European ancestry individuals |
Replication sample | NA |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 7114218 |
Reported gene | intergenic |
Mapped gene | RBFOX1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54715 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1478693-G |
SNPs | rs1478693 |
Merged | 0 |
SNP id current | 1478693 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.27 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 8.82 |
%95 Ci | [5.10-12.54] unit increase |
Platform | Illumina [2380486] (imputed) |
CNV | N |
Mapped trait | sleep time |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005274 |
Study accession | GCST002050 |