Human SNP ID | rs1476442 |
---|---|
Human chromosome | chr7 |
Human SNP position | 91643029 |
Pig chromosome | chr9 |
Pig SNP position | 78403163 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 7q21.2 |
Chromosome id | chr7 |
Chromosome position | 91643029 |
Reported gene | MTERF |
Mapped gene | LOC105375393 - MTERF1 |
Upstream gene id | 105375393 |
Downstream gene id | 7978 |
SNP gene ids | |
Upstream gene distance | 86747 |
Downstream gene distance | 229847 |
SNP risk allele | rs1476442-C |
SNPs | rs1476442 |
Merged | 0 |
SNP id current | 1476442 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.221 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (LDL ) |
Or beta | 0.02 |
%95 Ci | [NR] mg/dL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | low density lipoprotein cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004611 |
Study accession | GCST001762 |