SNP Detail For rs1475622
1.Mapping Information
Human SNP ID rs1475622
Human chromosome chr13
Human SNP position 82142028
Pig chromosome chr11
Pig SNP position 58661286
2.Annotation Information
PubMed ID25625606
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25625606
StudyInvestigating the Genetics of Hippocampal Volume in Older Adults without Dementia.
Disease/TraitHippocampal volume
Initial sample498 European ancestry older adult individuals
Replication sampleNA
Region13q31.1
Chromosome idchr13
Chromosome position82142028
Reported geneintergenic
Mapped geneLOC105370284 - LOC105370285
Upstream gene id105370284
Downstream gene id105370285
SNP gene ids
Upstream gene distance293278
Downstream gene distance208175
SNP risk allelers1475622-C
SNPsrs1475622
Merged0
SNP id current1475622
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta221.18
%95 Ci[125.49-316.87] unit decrease
PlatformAffymetrix, Illumina [at least 646791] (imputed)
CNVN
Mapped traithippocampal volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005035
Study accessionGCST002761