SNP Detail For rs147510300
1.Mapping Information
Human SNP ID rs147510300
Human chromosome chr12
Human SNP position 85924770
Pig chromosome chr5
Pig SNP position 101051086
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region12q21.31
Chromosome idchr12
Chromosome position85924770
Reported geneIntergenic
Mapped geneNTS - MGAT4C
Upstream gene id4922
Downstream gene id25834
SNP gene ids
Upstream gene distance41778
Downstream gene distance47511
SNP risk allelers147510300-G
SNPsrs147510300
Merged0
SNP id current147510300
Contextintergenic_variant
Intergenic1
Allele frequency1
P value0.0000008
Pvalue mlog6.09691001300805
P value text(AA)
Or beta0.498
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264