SNP Detail For rs1472750
1.Mapping Information
Human SNP ID rs1472750
Human chromosome chr10
Human SNP position 113475355
Pig chromosome chr14
Pig SNP position 135080384
2.Annotation Information
PubMed ID23049088
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23049088
StudyA genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
Disease/TraitMyopia (pathological)
Initial sample187 European ancestry cases, 1064 European ancestry controls
Replication sample
Region10q25.3
Chromosome idchr10
Chromosome position113475355
Reported geneintergenic
Mapped geneLOC105378490 - LOC101927654
Upstream gene id105378490
Downstream gene id101927654
SNP gene ids
Upstream gene distance154384
Downstream gene distance6685
SNP risk allelers1472750-?
SNPsrs1472750
Merged0
SNP id current1472750
Contextregulatory_region_variant
Intergenic1
Allele frequency0.075
P value0.000000005
Pvalue mlog8.30102999566398
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [152234]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001712