Human SNP ID | rs1471384 |
---|---|
Human chromosome | chr10 |
Human SNP position | 66204615 |
Pig chromosome | chr14 |
Pig SNP position | 75397656 |
PubMed ID | 24023788 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24023788 |
Study | Gene network analysis in a pediatric cohort identifies novel lung function genes. |
Disease/Trait | Lung function (FVC) |
Initial sample | 1,015 European ancestry individuals, 541 African American individuals |
Replication sample | NA |
Region | 10q21.3 |
Chromosome id | chr10 |
Chromosome position | 66204615 |
Reported gene | CTNNA3 |
Mapped gene | CTNNA3, LOC105378340 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 29119, 105378340 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1471384-? |
SNPs | rs1471384 |
Merged | 0 |
SNP id current | 1471384 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (AA) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 524000] |
CNV | N |
Mapped trait | vital capacity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004312 |
Study accession | GCST002162 |