Human SNP ID | rs1469170 |
---|---|
Human chromosome | chr11 |
Human SNP position | 110870290 |
Pig chromosome | chr9 |
Pig SNP position | 43505771 |
PubMed ID | 23717212 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23717212 |
Study | Imputation-based meta-analysis of severe malaria in three African populations. |
Disease/Trait | Malaria |
Initial sample | 5,425 African ancestry cases, 6,891 African ancestry controls |
Replication sample | NA |
Region | 11q23.1 |
Chromosome id | chr11 |
Chromosome position | 110870290 |
Reported gene | NR |
Mapped gene | HNRNPA1P60 - LOC105369488 |
Upstream gene id | 120364 |
Downstream gene id | 105369488 |
SNP gene ids | |
Upstream gene distance | 81221 |
Downstream gene distance | 51717 |
SNP risk allele | rs1469170-A |
SNPs | rs1469170 |
Merged | 0 |
SNP id current | 1469170 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000008 |
Pvalue mlog | 7.09691001300805 |
P value text | |
Or beta | 1.2 |
%95 Ci | [1.12-1.29] |
Platform | Illumina [1300000] (imputed) |
CNV | N |
Mapped trait | malaria |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001068 |
Study accession | GCST002033 |