SNP Detail For rs146646693
1.Mapping Information
Human SNP ID rs146646693
Human chromosome chr3
Human SNP position 68663397
Pig chromosome chr13
Pig SNP position 55146018
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3p14.1
Chromosome idchr3
Chromosome position68663397
Reported geneIntergenic
Mapped genePSMC1P1 - FAM19A4
Upstream gene id151645
Downstream gene id151647
SNP gene ids
Upstream gene distance26155
Downstream gene distance68367
SNP risk allelers146646693-T
SNPsrs146646693
Merged0
SNP id current146646693
Contextintergenic_variant
Intergenic1
Allele frequency0.999
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.303
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264