SNP Detail For rs1463525
1.Mapping Information
Human SNP ID rs1463525
Human chromosome chr3
Human SNP position 175243598
Pig chromosome chr13
Pig SNP position 122415926
2.Annotation Information
PubMed ID21408207
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21408207
StudyDifferential genetic associations for systemic lupus erythematosus based on anti-dsDNA autoantibody production.
Disease/TraitSystemic lupus erythematosus
Initial sample811 anti-dsDNA positive European ancestry cases, 906 anti-dsDNA negative European ancestry cases, 4,813 European ancestry controls
Replication sampleNA
Region3q26.31
Chromosome idchr3
Chromosome position175243598
Reported geneNAALADL2
Mapped geneNAALADL2-AS2, NAALADL2
Upstream gene id
Downstream gene id
SNP gene ids100874244, 254827
Upstream gene distance
Downstream gene distance
SNP risk allelers1463525-?
SNPsrs1463525
Merged0
SNP id current1463525
Contextintron_variant
Intergenic0
Allele frequency0.43
P value0.000008
Pvalue mlog5.09691001300805
P value text(case-only)
Or beta1.37
%95 Ci[1.19-1.59]
PlatformIllumina [421318] (imputed)
CNVN
Mapped traitsystemic lupus erythematosus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690
Study accessionGCST000996