SNP Detail For rs146111930
1.Mapping Information
Human SNP ID rs146111930
Human chromosome chr18
Human SNP position 27682406
Pig chromosome chr6
Pig SNP position 104995550
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region18q12.1
Chromosome idchr18
Chromosome position27682406
Reported geneIntergenic
Mapped geneLOC107985126 - LOC105372042
Upstream gene id107985126
Downstream gene id105372042
SNP gene ids
Upstream gene distance87262
Downstream gene distance104106
SNP risk allelers146111930-A
SNPsrs146111930
Merged0
SNP id current146111930
Contextintergenic_variant
Intergenic1
Allele frequency0.997
P value0.0000003
Pvalue mlog6.52287874528033
P value text(AA)
Or beta0.228
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264