Human SNP ID | rs1460196 |
---|---|
Human chromosome | chr18 |
Human SNP position | 52689042 |
Pig chromosome | chr1 |
Pig SNP position | 112307569 |
PubMed ID | 24009623 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24009623 |
Study | Genome-wide association study for biomarker identification of Rapamycin and Everolimus using a lymphoblastoid cell line system. |
Disease/Trait | Response to mTOR inhibitor (everolimus) |
Initial sample | 87 European ancestry individuals, 91 African American individuals, 94 Han Chinese ancestry individuals |
Replication sample | NA |
Region | 18q21.2 |
Chromosome id | chr18 |
Chromosome position | 52689042 |
Reported gene | DCC |
Mapped gene | DCC |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1630 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1460196-? |
SNPs | rs1460196 |
Merged | 0 |
SNP id current | 1460196 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.27 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix, Illumina [1348798] |
CNV | N |
Mapped trait | response to mTOR inhibitor |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005417 |
Study accession | GCST002157 |