SNP Detail For rs145809981
1.Mapping Information
Human SNP ID rs145809981
Human chromosome chr6
Human SNP position 31498440
Pig chromosome chr7
Pig SNP position 27233622
2.Annotation Information
PubMed ID26482879
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26482879
StudyMulti-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis.
Disease/TraitAtopic dermatitis
Initial sample18,900 European ancestry cases, 1,472 Japanese ancestry cases, 422 African American cases, 300 Latino cases, 305 cases, 84,166 European ancestry controls, 7,966 Japanese ancestry controls, 844 African American controls, 1,592 Latino controls, 896 controls
Replication sample30,588 European ancestry cases, 459 African American cases, 1,012 Chinese ancestry cases, 226,537 European ancestry controls, 729 African American controls, 1,362 Chinese ancestry controls
Region6p21.33
Chromosome idchr6
Chromosome position31498440
Reported geneMICB
Mapped geneMICB
Upstream gene id
Downstream gene id
SNP gene ids4277
Upstream gene distance
Downstream gene distance
SNP risk allelers145809981-C
SNPsrs145809981
Merged1
SNP id current41293864
Contextintron_variant
Intergenic0
Allele frequency0.86
P value0.000002
Pvalue mlog5.69897000433601
P value text(EA, fixed effects)
Or beta1.098901
%95 Ci
PlatformIllumina [15539996] (imputed)
CNVN
Mapped traitatopic eczema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000274
Study accessionGCST003184