Human SNP ID | rs1454292 |
---|---|
Human chromosome | chr8 |
Human SNP position | 5068943 |
Pig chromosome | chr15 |
Pig SNP position | 41218984 |
PubMed ID | 19896111 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19896111 |
Study | Common variants in the trichohyalin gene are associated with straight hair in Europeans. |
Disease/Trait | Hair morphology |
Initial sample | 4,845 European ancestry individuals from 2,892 families, 16,140 European ancestry individuals |
Replication sample | NA |
Region | 8p23.2 |
Chromosome id | chr8 |
Chromosome position | 5068943 |
Reported gene | AC019176.2 |
Mapped gene | CSMD1 - RSL24D1P7 |
Upstream gene id | 64478 |
Downstream gene id | 100129861 |
SNP gene ids | |
Upstream gene distance | 74137 |
Downstream gene distance | 2346 |
SNP risk allele | rs1454292-T |
SNPs | rs1454292 |
Merged | 0 |
SNP id current | 1454292 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 1000000] (imputed) |
CNV | N |
Mapped trait | hair morphology |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005038 |
Study accession | GCST000519 |