SNP Detail For rs1452093
1.Mapping Information
Human SNP ID rs1452093
Human chromosome chr21
Human SNP position 27372037
Pig chromosome chr13
Pig SNP position 200984706
2.Annotation Information
PubMed ID21546767
JournalAm J Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/21546767
StudyGenome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes.
Disease/TraitDialysis-related mortality
Initial sample610 African American type 2 diabetes cases
Replication sampleNA
Region21q21.3
Chromosome idchr21
Chromosome position27372037
Reported geneNCRNA00113, ADAMTS5
Mapped geneLOC102724355 - LOC105372761
Upstream gene id102724355
Downstream gene id105372761
SNP gene ids
Upstream gene distance20705
Downstream gene distance3334
SNP risk allelers1452093-?
SNPsrs1452093
Merged0
SNP id current1452093
Contextintron_variant
Intergenic1
Allele frequency0.23
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.59
%95 Ci[1.31-1.94]
PlatformAffymetrix [832357]
CNVN
Mapped traitchronic kidney disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003884
Study accessionGCST001066