SNP Detail For rs1451488
1.Mapping Information
Human SNP ID rs1451488
Human chromosome chr2
Human SNP position 199125384
Pig chromosome chr15
Pig SNP position 113918345
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region2q33.1
Chromosome idchr2
Chromosome position199125384
Reported geneNR
Mapped geneLOC105373831 - SATB2
Upstream gene id105373831
Downstream gene id23314
SNP gene ids
Upstream gene distance353054
Downstream gene distance144116
SNP risk allelers1451488-G
SNPsrs1451488
Merged
SNP id current1451488
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000006
Pvalue mlog7.22184874961635
P value text
Or beta1.0638298
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048