Human SNP ID | rs1451375 |
---|---|
Human chromosome | chr7 |
Human SNP position | 50555014 |
Pig chromosome | chr9 |
Pig SNP position | 150241909 |
PubMed ID | 19465909 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19465909 |
Study | Genome-wide and fine-resolution association analysis of malaria in West Africa. |
Disease/Trait | Malaria |
Initial sample | 958 Gambian ancestry cases, 1,382 Gambian ancestry controls |
Replication sample | 1,087 Gambian ancestry cases, 2,376 Gambian ancestry controls |
Region | 7p12.1 |
Chromosome id | chr7 |
Chromosome position | 50555014 |
Reported gene | DDC |
Mapped gene | DDC |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1644 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1451375-? |
SNPs | rs1451375 |
Merged | 0 |
SNP id current | 1451375 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.78 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.33 |
%95 Ci | [1.18-1.52] |
Platform | Affymetrix [402814] |
CNV | N |
Mapped trait | malaria |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001068 |
Study accession | GCST000410 |