SNP Detail For rs1451375
1.Mapping Information
Human SNP ID rs1451375
Human chromosome chr7
Human SNP position 50555014
Pig chromosome chr9
Pig SNP position 150241909
2.Annotation Information
PubMed ID19465909
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19465909
StudyGenome-wide and fine-resolution association analysis of malaria in West Africa.
Disease/TraitMalaria
Initial sample958 Gambian ancestry cases, 1,382 Gambian ancestry controls
Replication sample1,087 Gambian ancestry cases, 2,376 Gambian ancestry controls
Region7p12.1
Chromosome idchr7
Chromosome position50555014
Reported geneDDC
Mapped geneDDC
Upstream gene id
Downstream gene id
SNP gene ids1644
Upstream gene distance
Downstream gene distance
SNP risk allelers1451375-?
SNPsrs1451375
Merged0
SNP id current1451375
Contextintron_variant
Intergenic0
Allele frequency0.78
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.33
%95 Ci[1.18-1.52]
PlatformAffymetrix [402814]
CNVN
Mapped traitmalaria
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001068
Study accessionGCST000410