Human SNP ID | rs1449572 |
---|---|
Human chromosome | chr13 |
Human SNP position | 48892795 |
Pig chromosome | chr11 |
Pig SNP position | 19231494 |
PubMed ID | 23502783 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23502783 |
Study | The CCND1 c.870G>A polymorphism is a risk factor for t(11;14)(q13;q32) multiple myeloma. |
Disease/Trait | Multiple myeloma (IgH translocation) |
Initial sample | up to 1,660 European ancestry cases, 7,306 European ancestry controls |
Replication sample | |
Region | 13q14.2 |
Chromosome id | chr13 |
Chromosome position | 48892795 |
Reported gene | NR |
Mapped gene | PSME2P2 - FNDC3A |
Upstream gene id | 338099 |
Downstream gene id | 22862 |
SNP gene ids | |
Upstream gene distance | 120925 |
Downstream gene distance | 83117 |
SNP risk allele | rs1449572-A |
SNPs | rs1449572 |
Merged | 0 |
SNP id current | 1449572 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.14 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (t4;14 vs. controls) |
Or beta | 1.73 |
%95 Ci | [1.36-2.21] |
Platform | Illumina [414804] (imputed) |
CNV | N |
Mapped trait | multiple myeloma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001378 |
Study accession | GCST001906 |