SNP Detail For rs1449572
1.Mapping Information
Human SNP ID rs1449572
Human chromosome chr13
Human SNP position 48892795
Pig chromosome chr11
Pig SNP position 19231494
2.Annotation Information
PubMed ID23502783
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23502783
StudyThe CCND1 c.870G>A polymorphism is a risk factor for t(11;14)(q13;q32) multiple myeloma.
Disease/TraitMultiple myeloma (IgH translocation)
Initial sampleup to 1,660 European ancestry cases, 7,306 European ancestry controls
Replication sample
Region13q14.2
Chromosome idchr13
Chromosome position48892795
Reported geneNR
Mapped genePSME2P2 - FNDC3A
Upstream gene id338099
Downstream gene id22862
SNP gene ids
Upstream gene distance120925
Downstream gene distance83117
SNP risk allelers1449572-A
SNPsrs1449572
Merged0
SNP id current1449572
Contextregulatory_region_variant
Intergenic1
Allele frequency0.14
P value0.000008
Pvalue mlog5.09691001300805
P value text(t4;14 vs. controls)
Or beta1.73
%95 Ci[1.36-2.21]
PlatformIllumina [414804] (imputed)
CNVN
Mapped traitmultiple myeloma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001378
Study accessionGCST001906