SNP Detail For rs1448284
1.Mapping Information
Human SNP ID rs1448284
Human chromosome chr4
Human SNP position 33078033
Pig chromosome chr8
Pig SNP position 26588910
2.Annotation Information
PubMed ID20197096
JournalNeuroimage
Linkwww.ncbi.nlm.nih.gov/pubmed/20197096
StudyGenome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer__s disease.
Disease/TraitBrain structure (temporal lobe volume)
Initial sample173 European ancestry Alzheimer__s disease cases, 361 European ancestry Mild Cognitive Impairment cases, 208 European ancestry controls
Replication sampleNA
Region4p15.1
Chromosome idchr4
Chromosome position33078033
Reported geneintergenic
Mapped geneMAPRE1P2 - LOC105374391
Upstream gene id642305
Downstream gene id105374391
SNP gene ids
Upstream gene distance66215
Downstream gene distance389399
SNP risk allelers1448284-T
SNPsrs1448284
Merged0
SNP id current1448284
Contextintergenic_variant
Intergenic1
Allele frequency0.03
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta9939.9
%95 Ci[NR] unit increase
PlatformIllumina [546314]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST000614