Human SNP ID | rs1448284 |
---|---|
Human chromosome | chr4 |
Human SNP position | 33078033 |
Pig chromosome | chr8 |
Pig SNP position | 26588910 |
PubMed ID | 20197096 |
---|---|
Journal | Neuroimage |
Link | www.ncbi.nlm.nih.gov/pubmed/20197096 |
Study | Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer__s disease. |
Disease/Trait | Brain structure (temporal lobe volume) |
Initial sample | 173 European ancestry Alzheimer__s disease cases, 361 European ancestry Mild Cognitive Impairment cases, 208 European ancestry controls |
Replication sample | NA |
Region | 4p15.1 |
Chromosome id | chr4 |
Chromosome position | 33078033 |
Reported gene | intergenic |
Mapped gene | MAPRE1P2 - LOC105374391 |
Upstream gene id | 642305 |
Downstream gene id | 105374391 |
SNP gene ids | |
Upstream gene distance | 66215 |
Downstream gene distance | 389399 |
SNP risk allele | rs1448284-T |
SNPs | rs1448284 |
Merged | 0 |
SNP id current | 1448284 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.03 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 9939.9 |
%95 Ci | [NR] unit increase |
Platform | Illumina [546314] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST000614 |