SNP Detail For rs1448190
1.Mapping Information
Human SNP ID rs1448190
Human chromosome chr2
Human SNP position 111618386
Pig chromosome chr3
Pig SNP position 46531233
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region2q13
Chromosome idchr2
Chromosome position111618386
Reported geneANAPC1
Mapped geneLOC105373559 - LOC105373987
Upstream gene id105373559
Downstream gene id105373987
SNP gene ids
Upstream gene distance5845
Downstream gene distance82228
SNP risk allelers1448190-A
SNPsrs1448190
Merged0
SNP id current1448190
Contextintron_variant
Intergenic1
Allele frequency0.381
P value0.000008
Pvalue mlog5.09691001300805
P value text(IL6 )
Or beta0.03
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitinterleukin-6 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004810
Study accessionGCST001762