SNP Detail For rs1445021
1.Mapping Information
Human SNP ID rs1445021
Human chromosome chr15
Human SNP position 68443247
Pig chromosome chr1
Pig SNP position 184083111
2.Annotation Information
PubMed ID21347282
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21347282
StudyGenome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.
Disease/TraitHDL cholesterol
Initial sample7,813 African American individuals
Replication sample4,323 African American and Afro-Caribbean individuals
Region15q23
Chromosome idchr15
Chromosome position68443247
Reported geneintergenic
Mapped geneITGA11 - LOC105370873
Upstream gene id22801
Downstream gene id105370873
SNP gene ids
Upstream gene distance11087
Downstream gene distance39955
SNP risk allelers1445021-A
SNPsrs1445021
Merged0
SNP id current1445021
Contextintergenic_variant
Intergenic1
Allele frequency0.94
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.1365
%95 Ci[0.076-0.197] unit increase
PlatformAffymetrix [~ 2740000] (imputed)
CNVN
Mapped traithigh density lipoprotein cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004612
Study accessionGCST000974