SNP Detail For rs144137862
1.Mapping Information
Human SNP ID rs144137862
Human chromosome chr5
Human SNP position 131105953
Pig chromosome chr2
Pig SNP position 138733473
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5q23.3
Chromosome idchr5
Chromosome position131105953
Reported geneIntergenic
Mapped geneLOC105379172 - HINT1
Upstream gene id105379172
Downstream gene id3094
SNP gene ids
Upstream gene distance37405
Downstream gene distance53330
SNP risk allelers144137862-G
SNPsrs144137862
Merged0
SNP id current144137862
Contextintergenic_variant
Intergenic1
Allele frequency0.998
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.255
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264