SNP Detail For rs144063842
1.Mapping Information
Human SNP ID rs144063842
Human chromosome chr4
Human SNP position 66534537
Pig chromosome chr8
Pig SNP position 68655052
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region4q13.2
Chromosome idchr4
Chromosome position66534537
Reported geneIntergenic
Mapped geneRPS23P3 - LOC105377262
Upstream gene id100271091
Downstream gene id105377262
SNP gene ids
Upstream gene distance103016
Downstream gene distance328327
SNP risk allelers144063842-T
SNPsrs144063842
Merged0
SNP id current144063842
Contextintergenic_variant
Intergenic1
Allele frequency0.991
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.685
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263