SNP Detail For rs144046596
1.Mapping Information
Human SNP ID rs144046596
Human chromosome chr6
Human SNP position 117011437
Pig chromosome chr1
Pig SNP position 50000775
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region6q22.1
Chromosome idchr6
Chromosome position117011437
Reported geneIntergenic
Mapped geneRFX6 - RPS29P13
Upstream gene id222546
Downstream gene id100271122
SNP gene ids
Upstream gene distance79274
Downstream gene distance37233
SNP risk allelers144046596-T
SNPsrs144046596
Merged0
SNP id current144046596
Contextintergenic_variant
Intergenic1
Allele frequency0.985
P value0.0000006
Pvalue mlog6.22184874961635
P value text(AA)
Or beta0.08
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264