SNP Detail For rs143954261
1.Mapping Information
Human SNP ID rs143954261
Human chromosome chr5
Human SNP position 127393758
Pig chromosome chr2
Pig SNP position 135628412
2.Annotation Information
PubMed ID23535033
JournalAlzheimers Dement
Linkwww.ncbi.nlm.nih.gov/pubmed/23535033
StudyGenome-wide association study of the rate of cognitive decline in Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (cognitive decline)
Initial sample303 European ancestry cases
Replication sample
Region5q23.2
Chromosome idchr5
Chromosome position127393758
Reported geneMEGF10
Mapped geneMEGF10
Upstream gene id
Downstream gene id
SNP gene ids84466
Upstream gene distance
Downstream gene distance
SNP risk allelers143954261-?
SNPsrs143954261
Merged0
SNP id current143954261
Contextintron_variant
Intergenic0
Allele frequency0.04
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta0.29
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001915