SNP Detail For rs143902882
1.Mapping Information
Human SNP ID rs143902882
Human chromosome chr3
Human SNP position 77561056
Pig chromosome chr13
Pig SNP position 187771746
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3p12.3
Chromosome idchr3
Chromosome position77561056
Reported geneROBO2
Mapped geneROBO2
Upstream gene id
Downstream gene id
SNP gene ids6092
Upstream gene distance
Downstream gene distance
SNP risk allelers143902882-T
SNPsrs143902882
Merged0
SNP id current143902882
Contextintron_variant
Intergenic0
Allele frequency0.993
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.106
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264