SNP Detail For rs1436953
1.Mapping Information
Human SNP ID rs1436953
Human chromosome chr15
Human SNP position 62121815
Pig chromosome chr1
Pig SNP position 121299332
2.Annotation Information
PubMed ID21799836
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/21799836
StudyA genome-wide association study confirms previously reported loci for type 2 diabetes in Han Chinese.
Disease/TraitType 2 diabetes
Initial sample793 Han Chinese ancestry cases, 806 Han Chinese ancestry controls
Replication sample4,445 Han Chinese ancestry cases, 4,458 Han Chinese ancestry controls
Region15q22.2
Chromosome idchr15
Chromosome position62121815
Reported geneC2CD4B, C2CD4A
Mapped geneNPM1P47 - C2CD4B
Upstream gene id100129972
Downstream gene id388125
SNP gene ids
Upstream gene distance38416
Downstream gene distance41723
SNP risk allelers1436953-G
SNPsrs1436953
Merged0
SNP id current1436953
Contextintergenic_variant
Intergenic1
Allele frequency0.64
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.14
%95 Ci[NR]
PlatformIllumina [474515]
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST001173