Human SNP ID | rs1436953 |
---|---|
Human chromosome | chr15 |
Human SNP position | 62121815 |
Pig chromosome | chr1 |
Pig SNP position | 121299332 |
PubMed ID | 21799836 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/21799836 |
Study | A genome-wide association study confirms previously reported loci for type 2 diabetes in Han Chinese. |
Disease/Trait | Type 2 diabetes |
Initial sample | 793 Han Chinese ancestry cases, 806 Han Chinese ancestry controls |
Replication sample | 4,445 Han Chinese ancestry cases, 4,458 Han Chinese ancestry controls |
Region | 15q22.2 |
Chromosome id | chr15 |
Chromosome position | 62121815 |
Reported gene | C2CD4B, C2CD4A |
Mapped gene | NPM1P47 - C2CD4B |
Upstream gene id | 100129972 |
Downstream gene id | 388125 |
SNP gene ids | |
Upstream gene distance | 38416 |
Downstream gene distance | 41723 |
SNP risk allele | rs1436953-G |
SNPs | rs1436953 |
Merged | 0 |
SNP id current | 1436953 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.64 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.14 |
%95 Ci | [NR] |
Platform | Illumina [474515] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001173 |